CRAN/E | GOCompare

GOCompare

Comprehensive GO Terms Comparison Between Species

Installation

About

Supports the assessment of functional enrichment analyses obtained for several lists of genes and provides a workflow to analyze them between two species via weighted graphs. Methods are described in Sosa et al. (2023) doi:10.1016/j.ygeno.2022.110528.

github.com/ccsosa/GOCompare
Bug report File report

Key Metrics

Version 1.0.2.1
R ≥ 4.0.0
Published 2022-12-09 510 days ago
Needs compilation? no
License GPL (≥ 3)
CRAN checks GOCompare results

Downloads

Yesterday 5 0%
Last 7 days 60 -24%
Last 30 days 276 +1%
Last 90 days 768 -19%
Last 365 days 3.247 +9%

Maintainer

Maintainer

Chrystian Camilo Sosa

ccsosaa@javerianacali.edu.co

Authors

Chrystian Camilo Sosa

aut / cre / cph

Diana Carolina Clavijo-Buriticá

aut

Mauricio Alberto Quimbaya

aut

Maria Victoria Diaz

ctb

Camila Riccio Rengifo

ctb

Nicolas López-Rozo

ctb

Victor Hugo García Merchán

aut / ctb

Arlen James Mosquera

ctb

Andrés Álvarez

ctb

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

GOCompare archive

Depends

R ≥ 4.0.0

Imports

base ≥ 3.5
utils ≥ 3.5
methods ≥ 3.5
stats
grDevices
ape
vegan
ggplot2
ggrepel
igraph
parallel
stringr
mathjaxr

Suggests

testthat ≥ 3.0.0