CRAN/E | FateID

FateID

Quantification of Fate Bias in Multipotent Progenitors

Installation

About

Application of 'FateID' allows computation and visualization of cell fate bias for multi-lineage single cell transcriptome data. Herman, J.S., Sagar, Grün D. (2018) doi:10.1038/nmeth.4662.

Key Metrics

Version 0.2.2
R ≥ 3.5.0
Published 2022-06-14 685 days ago
Needs compilation? no
License GPL-3
CRAN checks FateID results

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Maintainer

Maintainer

Dominic Grün

dominic.gruen@gmail.com

Authors

Dominic Grün

Material

Reference manual
Package source

Vignettes

An introduction to FateID.

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

FateID archive

Depends

R ≥ 3.5.0

Imports

graphics
grDevices
locfit
matrixStats
pheatmap
princurve
randomForest
RColorBrewer
Rtsne
som
stats
umap
utils

Suggests

DESeq2
knitr
rmarkdown

Reverse Imports

RaceID