CRAN/E | EnrichIntersect

EnrichIntersect

Enrichment Analysis and Intersecting Sankey Diagram

Installation

About

A flexible tool for enrichment analysis based on user-defined sets. It allows users to perform over-representation analysis of the custom sets among any specified ranked feature list, hence making enrichment analysis applicable to various types of data from different scientific fields. 'EnrichIntersect' also enables an interactive means to visualize identified associations based on, for example, the mix-lasso model (Zhao et al., 2022 doi:10.1016/j.isci.2022.104767) or similar methods.

Citation EnrichIntersect citation info
github.com/ocbe-uio/EnrichIntersect
Bug report File report

Key Metrics

Version 0.7
R ≥ 4.0
Published 2024-03-14 50 days ago
Needs compilation? no
License MIT
License File
CRAN checks EnrichIntersect results

Downloads

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Maintainer

Maintainer

Zhi Zhao

zhi.zhao@medisin.uio.no

Authors

Zhi Zhao

aut / cre

Manuela Zucknick

aut

Tero Aittokallio

ctb

Material

README
NEWS
Reference manual
Package source

Vignettes

EnrichIntersect

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

EnrichIntersect archive

Depends

R ≥ 4.0

Imports

ggplot2
dplyr
networkD3
jsonlite
htmlwidgets
webshot2
stats
methods
grDevices

Suggests

knitr