CRAN/E | EbayesThresh

EbayesThresh

Empirical Bayes Thresholding and Related Methods

Installation

About

Empirical Bayes thresholding using the methods developed by I. M. Johnstone and B. W. Silverman. The basic problem is to estimate a mean vector given a vector of observations of the mean vector plus white noise, taking advantage of possible sparsity in the mean vector. Within a Bayesian formulation, the elements of the mean vector are modelled as having, independently, a distribution that is a mixture of an atom of probability at zero and a suitable heavy-tailed distribution. The mixing parameter can be estimated by a marginal maximum likelihood approach. This leads to an adaptive thresholding approach on the original data. Extensions of the basic method, in particular to wavelet thresholding, are also implemented within the package.

github.com/stephenslab/EbayesThresh
Bug report File report

Key Metrics

Version 1.4-12
Published 2017-08-08 2461 days ago
Needs compilation? no
License GPL-2
License GPL-3
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Maintainer

Maintainer

Peter Carbonetto

peter.carbonetto@gmail.com

Authors

Bernard W. Silverman

aut

Ludger Evers

aut

Kan Xu

aut

Peter Carbonetto

aut / cre

Matthew Stephens

aut

Material

Reference manual
Package source

In Views

Bayesian

Vignettes

EbayesThresh

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

EbayesThresh archive

Imports

stats
wavethresh

Suggests

testthat
knitr
rmarkdown
dplyr
ggplot2

Reverse Depends

adlift
binhf
CVThresh
nlt

Reverse Imports

icmm
POCRE