CRAN/E | Cyclops

Cyclops

Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis

Installation

About

This model fitting tool incorporates cyclic coordinate descent and majorization-minimization approaches to fit a variety of regression models found in large-scale observational healthcare data. Implementations focus on computational optimization and fine-scale parallelization to yield efficient inference in massive datasets. Please see: Suchard, Simpson, Zorych, Ryan and Madigan (2013) doi:10.1145/2414416.2414791.

Citation Cyclops citation info
github.com/ohdsi/cyclops
Bug report File report

Key Metrics

Version 3.4.0
R ≥ 3.5.0
Published 2023-10-31 171 days ago
Needs compilation? yes
License Apache License 2.0
CRAN checks Cyclops results

Downloads

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Maintainer

Maintainer

Marc A. Suchard

msuchard@ucla.edu

Authors

Marc A. Suchard

aut / cre

Martijn J. Schuemie

aut

Trevor R. Shaddox

aut

Yuxi Tian

aut

Jianxiao Yang

aut

Eric Kawaguchi

aut

Sushil Mittal

ctb

Observational Health Data Sciences
Informatics

cph

Marcus Geelnard

cph / ctb

(provided the TinyThread library)

Rutgers University

cph / ctb

(provided the HParSearch routine)

R Development Core Team

cph / ctb

(provided the ZeroIn routine)

Material

README
NEWS
Reference manual
Package source

In Views

Survival

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

Cyclops archive

Depends

R ≥ 3.5.0

Imports

rlang
Matrix
Rcpp ≥ 0.12.12
Andromeda ≥ 0.3.1
dplyr
methods
survival
bit64

Suggests

testthat
readr
MASS
gnm
ggplot2
microbenchmark
cmprsk

LinkingTo

Rcpp
RcppEigen ≥ 0.3.2

Reverse Depends

BrokenAdaptiveRidge
IterativeHardThresholding

Reverse Imports

EvidenceSynthesis

Reverse Suggests

EmpiricalCalibration