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ComICS

Computational Methods for Immune Cell-Type Subsets

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About

Provided are Computational methods for Immune Cell-type Subsets, including:(1) DCQ (Digital Cell Quantifier) to infer global dynamic changes in immune cell quantities within a complex tissue; and (2) VoCAL (Variation of Cell-type Abundance Loci) a deconvolution-based method that utilizes transcriptome data to infer the quantities of immune-cell types, and then uses these quantitative traits to uncover the underlying DNA loci.

dcq.tau.ac.il/
csgi.tau.ac.il/VoCAL/

Key Metrics

Version 1.0.4
R ≥ 3.1.1
Published 2018-05-13 2173 days ago
Needs compilation? no
License GPL-2
CRAN checks ComICS results

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Maintainer

Maintainer

Yael Steuerman

yaelsteu@mail.tau.ac.il

Authors

Yael Steuerman

aut / cre

Irit Gat-Viks

aut

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

ComICS archive

Depends

R ≥ 3.1.1

Imports

glmnet
stats

Reverse Imports

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