ClustAssess
Tools for Assessing Clustering
A set of tools for evaluating clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) doi:10.1038/srep06207), as well as similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) doi:10.1038/s41598-019-44892-y). Additionally, this package enables stability-based parameter assessment for graph-based clustering pipelines typical in single-cell data analysis.
- GitHub
- https://core-bioinformatics.github.io/ClustAssess/
- File a bug report
- ClustAssess results
- ClustAssess.pdf
- Version1.0.0
- R versionR (≥ 4.0.0)
- LicenseMIT
- Needs compilation?Yes
- ClustAssess citation info
- Last release01/31/2025
Documentation
Team
Arash Shahsavari
MaintainerShow author detailsIrina Mohorianu
Show author detailsRolesAuthorRafael Kollyfas
Show author detailsRolesContributorMiguel Larraz Lopez de Novales
Show author detailsRolesAuthorLiviu Ciortuz
Show author detailsRolesContributor
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Dependencies
- Imports32 packages
- Suggests16 packages
- Linking To2 packages