CRAN/E | CNprep

CNprep

Pre-Process DNA Copy Number (CN) Data for Detection of CN Events

Installation

About

DNA copy number data evaluation using both their initial form (copy number as a noisy function of genomic position) and their approximation by a piecewise-constant function (segmentation), for the purpose of identifying genomic regions where the copy number differs from the norm.

Key Metrics

Version 2.2
R ≥ 2.10
Published 2022-05-24 696 days ago
Needs compilation? no
License GPL-2
CRAN checks CNprep results

Downloads

Yesterday 4
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Last 30 days 173 -13%
Last 90 days 784 +31%
Last 365 days 2.551 -30%

Maintainer

Maintainer

Guoli Sun

guolisun87@gmail.com

Authors

Alex Krasnitz
Guoli Sun

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

CNprep archive

Depends

R ≥ 2.10
parallel
mclust
rlecuyer
stats