CRAN/E | CASMAP

CASMAP

Detection of Statistically Significant Combinations of SNPs in Association Mapping

Installation

About

A significant pattern mining-based toolbox for region-based genome-wide association studies and higher-order epistasis analyses, implementing the methods described in Llinares-López et al. (2017) doi:10.1093/bioinformatics/btx071.

System requirements C++11

Key Metrics

Version 0.6.1
R ≥ 3.0.2
Published 2020-05-05 1235 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks CASMAP results

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Maintainer

Maintainer

Dean Bodenham

deanbodenhambsse@gmail.com

Authors

Felipe Llinares-López

aut / cph

Laetitia Papaxanthos

aut / cph

Damian Roqueiro

aut / cph

Matthew Baker
ctr
Mikołaj Rybiński
ctr
Uwe Schmitt
ctr
Dean Bodenham

aut / cre / cph

Karsten Borgwardt

aut / fnd / cph

Material

Reference manual
Package source

Vignettes

CASMAP-introduction

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

CASMAP archive

Depends

R ≥ 3.0.2

Imports

methods
Rcpp

Suggests

testthat
knitr
rmarkdown

LinkingTo

Rcpp