CRAN/E | BioCircos

BioCircos

Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js'

Installation

About

Implement in 'R' interactive Circos-like visualizations of genomic data, to map information such as genetic variants, genomic fusions and aberrations to a circular genome, as proposed by the 'JavaScript' library 'BioCircos.js', based on the 'JQuery' and 'D3' technologies. The output is by default displayed in stand-alone HTML documents or in the 'RStudio' viewer pane. Moreover it can be integrated in 'R Markdown' documents and 'Shiny' applications.

github.com/lvulliard/BioCircos.R

Key Metrics

Version 0.3.4
R ≥ 3.1.0
Published 2019-03-19 1862 days ago
Needs compilation? no
License GPL-2
License File
CRAN checks BioCircos results

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Maintainer

Maintainer

Loan Vulliard

lvulliard@cemm.at

Authors

Loan Vulliard

trl / cre

Xiaowei Chen

aut

Ya Cui

aut

Material

README
Reference manual
Package source

Vignettes

BioCircos: Generating circular multi-track plots

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

BioCircos archive

Depends

R ≥ 3.1.0

Imports

RColorBrewer
htmlwidgets
jsonlite
plyr
grDevices

Suggests

knitr
rmarkdown