CRAN/E | BeviMed

BeviMed

Bayesian Evaluation of Variant Involvement in Mendelian Disease

Installation

About

A fast integrative genetic association test for rare diseases based on a model for disease status given allele counts at rare variant sites. Probability of association, mode of inheritance and probability of pathogenicity for individual variants are all inferred in a Bayesian framework - 'A Fast Association Test for Identifying Pathogenic Variants Involved in Rare Diseases', Greene et al 2017 doi:10.1016/j.ajhg.2017.05.015.

Citation BeviMed citation info

Key Metrics

Version 5.8
R ≥ 3.0.0
Published 2021-01-31 964 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks BeviMed results

Downloads

Last 24 hours 0 -100%
Last 7 days 52 -26%
Last 30 days 276 -5%
Last 90 days 811 -17%
Last 365 days 3.739 -39%

Maintainer

Maintainer

Daniel Greene

dg333@cam.ac.uk

Authors

Daniel Greene
Sylvia Richardson
Ernest Turro

Material

NEWS
Reference manual
Package source

Vignettes

BeviMed Introduction
BeviMed with VCFs
BeviMed Guide

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

BeviMed archive

Depends

R ≥ 3.0.0

Imports

Rcpp ≥ 0.12.3
Matrix
methods

Suggests

rmarkdown
knitr

LinkingTo

Rcpp