CRAN/E | BEDMatrix

BEDMatrix

Extract Genotypes from a PLINK .bed File

Installation

About

A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (), the whole genome association analysis toolset, without loading the entire file into memory.

Citation BEDMatrix citation info
github.com/QuantGen/BEDMatrix
Bug report File report

Key Metrics

Version 2.0.3
R ≥ 3.0.2
Published 2020-07-08 1385 days ago
Needs compilation? yes
License MIT
License File
CRAN checks BEDMatrix results

Downloads

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Maintainer

Maintainer

Alexander Grueneberg

cran@agrueneberg.info

Authors

Alexander Grueneberg

aut / cre

Gustavo de los Campos

ctb

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

BEDMatrix archive

Depends

R ≥ 3.0.2

Imports

methods
crochet ≥ 2.3.0

Suggests

data.table
LinkedMatrix
tinytest

Reverse Depends

BGData
EBPRS

Reverse Imports

mrMLM
phers

Reverse Suggests

genio
groupedSurv
popkin
simtrait
symDMatrix