CRAN/E | AutoScore

AutoScore

An Interpretable Machine Learning-Based Automatic Clinical Score Generator

Installation

About

A novel interpretable machine learning-based framework to automate the development of a clinical scoring model for predefined outcomes. Our novel framework consists of six modules: variable ranking with machine learning, variable transformation, score derivation, model selection, domain knowledge-based score fine-tuning, and performance evaluation.The The original AutoScore structure is described in the research paperdoi:10.2196/21798. A full tutorial can be found here. Users or clinicians could seamlessly generate parsimonious sparse-score risk models (i.e., risk scores), which can be easily implemented and validated in clinical practice. We hope to see its application in various medical case studies.

Citation AutoScore citation info
github.com/nliulab/AutoScore
Bug report File report

Key Metrics

Version 1.0.0
R ≥ 3.5.0
Published 2022-10-15 552 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks AutoScore results

Downloads

Yesterday 25 0%
Last 7 days 63 -15%
Last 30 days 340 -11%
Last 90 days 1.262 +16%
Last 365 days 4.450 +4%

Maintainer

Maintainer

Feng Xie

xief@u.duke.nus.edu

Authors

Feng Xie

aut / cre

Yilin Ning

aut

Han Yuan

aut

Mingxuan Liu

aut

Seyed Ehsan Saffari

aut

Siqi Li

aut

Bibhas Chakraborty

aut

Nan Liu

aut

Material

Reference manual
Package source

Vignettes

Brief Introduction

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

AutoScore archive

Depends

R ≥ 3.5.0

Imports

tableone
pROC
randomForest
ggplot2
knitr
Hmisc
car
coxed
dplyr
ordinal
survival
tidyr
plotly
magrittr
randomForestSRC
rlang
survAUC
survminer

Suggests

rpart
rmarkdown