CRAN/E | valr

valr

Genome Interval Arithmetic

Installation

About

Read and manipulate genome intervals and signals. Provides functionality similar to command-line tool suites within R, enabling interactive analysis and visualization of genome-scale data. Riemondy et al. (2017) doi:10.12688/f1000research.11997.1.

Citation valr citation info
github.com/rnabioco/valr/
rnabioco.github.io/valr/
Bug report File report

Key Metrics

Version 0.8.1
R ≥ 3.1.2
Published 2024-04-22 14 days ago
Needs compilation? yes
License MIT
License File
CRAN checks valr results

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Maintainer

Maintainer

Kent Riemondy

kent.riemondy@cuanschutz.edu

Authors

Jay Hesselberth

aut

Kent Riemondy

aut / cre

RNA Bioscience Initiative

fnd / cph

Material

README
NEWS
Reference manual
Package source

In Views

Omics

Vignettes

valr-overview

macOS

r-prerel

arm64

r-release

arm64

r-oldrel

arm64

r-prerel

x86_64

r-release

x86_64

Windows

r-prerel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

valr archive

Depends

R ≥ 3.1.2

Imports

broom
cli
dplyr ≥ 0.8.0
ggplot2
lifecycle
Rcpp ≥1.0.0
readr
rlang
rtracklayer
stringr
tibble ≥ 1.4.2

Suggests

bench
covr
cowplot
curl
DBI
dbplyr
devtools
DT
GenomicRanges
IRanges
knitr
purrr
RMariaDB
rmarkdown
S4Vectors
testthat ≥ 3.0.0
vdiffr ≥ 1.0.0
tidyr

LinkingTo

Rcpp ≥ 1.0.0

Reverse Imports

RLSeq