CRAN/E | tcpl

tcpl

ToxCast Data Analysis Pipeline

Installation

About

A set of tools for processing and modeling high-throughput and high-content chemical screening data. The package was developed for the the chemical screening data generated by the US EPA ToxCast program, but can be used for diverse chemical screening efforts.

github.com/USEPA/CompTox-ToxCast-tcpl

Key Metrics

Version 3.1.0
R ≥ 3.5.0
Published 2023-10-06 211 days ago
Needs compilation? no
License MIT
License File
CRAN checks tcpl results

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Maintainer

Maintainer

Jason Brown

brown.jason@epa.gov

Authors

Richard S Judson

ctb / ths

Dayne L Filer

aut

Jason Brown

cre

Sarah E Davidson-Fritz

ctb

Madison Feshuk

ctb

Lori Kolaczkowski

ctb

Kurt Dunham

ctb

Carter Thunes

ctb

Ashley Ko

ctb

Todd Zurlinden

ctb

Parth Kothiya

ctb

Woodrow R Setzer

ctb

Matthew T Martin

ctb / ths

Katie Paul Friedman

ctb

Material

NEWS
Reference manual
Package source

Vignettes

Assay Registration
tcpl 2.0 Data Processing
tcpl v3.0 Data Processing
tcpl v3.0 Data Retrieval
The ToxCast(TM) Analysis Pipeline(tcpl) An R Package for Processing and Modeling Chemical Screening Data (Version 3.0)

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

tcpl archive

Depends

R ≥ 3.5.0

Imports

data.table ≥ 1.9.4
DBI
RMariaDB
numDeriv
RColorBrewer
utils
stats
methods
graphics
grDevices
sqldf
dplyr
tidyr
plotly
tcplfit2
ggplot2
gridExtra
stringr

Suggests

roxygen2
knitr
prettydoc
rmarkdown
htmlTable
testthat ≥ 3.0.0
reshape2
viridis
kableExtra
colorspace
magrittr
vdiffr

Reverse Suggests

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