What does the R-package 'stan4bart' do?

Bayesian Additive Regression Trees with Stan-Sampled Parametric Extensions

Who authored stan4bart?

Vincent Dorie, Ben Goodrich, Jonah Gabry, Imad Ali, Sam Brilleman, Paul-Christian Burkner, Joshua Pritikin, Andrew Gelman, Bob Carpenter, Matt Hoffman, Daniel Lee, Michael Betancourt, Marcus Brubaker, Jiqiang Guo, Peter Li, Allen Riddell, Marco Inacio, Mitzi Morris, Jeffrey Arnold, Rob Goedman, Brian Lau, Rob Trangucci, Alp Kucukelbir, Robert Grant, Dustin Tran, Michael Malecki, Yuanjun Gao, Trustees of Columbia University, Lawrence Livermore National Security, The Regents of the University of California, Southern Methodist University, Douglas Bates, Martin Maechler, Ben Bolker, Steve Walker, Armon Dadgar, Bothner Per, Elliston Ben, Free Software Foundation, Guido U Draheim, Maarten Bosmans, Christophe Tournayre, Michael Petch, Rafael de Lucena Valle, Steven G. Johnson, Matteo Frigo, Scott Pakin

CRAN/E | stan4bart

Installation

About

Fits semiparametric linear and multilevel models with non-parametric additive Bayesian additive regression tree (BART; Chipman, George, and McCulloch (2010) doi:10.1214/09-AOAS285) components and Stan (Stan Development Team (2021) ) sampled parametric ones. Multilevel models can be expressed using 'lme4' syntax (Bates, Maechler, Bolker, and Walker (2015) doi:10.18637/jss.v067.i01).

github.com/vdorie/stan4bart
Bug report	File report

Key Metrics

Version	0.0-7
R	≥ 3.5-0
Published	2023-12-08 142 days ago
Needs compilation?	yes
License	GPL (≥ 3)
CRAN checks	stan4bart results

Downloads

Yesterday	13 -24%
Last 7 days	71 +25%
Last 30 days	223 -16%
Last 90 days	748 -34%
Last 365 days	3.949 +37%

Maintainer

Vincent Dorie

vdorie@gmail.com

Authors

Vincent Dorie	aut / cre
Ben Goodrich	ctb (rstanarm_functions.R, StanHeaders)
Jonah Gabry	ctb (rstanarm_functions.R, StanHeaders)
Imad Ali	ctb (rstanarm_functions.R)
Sam Brilleman	ctb (rstanarm_functions.R)
Paul-Christian Burkner	ctb (rstanarm_functions.R)
Joshua Pritikin	ctb (StanHeaders)
Andrew Gelman	ctb (StanHeaders)
Bob Carpenter	ctb (StanHeaders)
Matt Hoffman	ctb (StanHeaders)
Daniel Lee	ctb (StanHeaders)
Michael Betancourt	ctb (StanHeaders)
Marcus Brubaker	ctb (StanHeaders)
Jiqiang Guo	ctb (StanHeaders)
Peter Li	ctb (StanHeaders)
Allen Riddell	ctb (StanHeaders)
Marco Inacio	ctb (StanHeaders)
Mitzi Morris	ctb (StanHeaders)
Jeffrey Arnold	ctb (StanHeaders)
Rob Goedman	ctb (StanHeaders)
Brian Lau	ctb (StanHeaders)
Rob Trangucci	ctb (StanHeaders)
Alp Kucukelbir	ctb (StanHeaders)
Robert Grant	ctb (StanHeaders)
Dustin Tran	ctb (StanHeaders)
Michael Malecki	ctb (StanHeaders)
Yuanjun Gao	ctb (StanHeaders)
Trustees of Columbia University	cph (rstanarm_functions.R, StanHeaders)
Lawrence Livermore National Security	cph (CVODES)
The Regents of the University of California	cph (CVODES)
Southern Methodist University	cph (CVODES)
Douglas Bates	ctb (lme4_functions.R)
Martin Maechler	ctb (lme4_functions.R)
Ben Bolker	ctb (lme4_functions.R)
Steve Walker	ctb (lme4_functions.R)
Armon Dadgar	ctb (adaptive radix tree)
Bothner Per	ctb (config.guess)
Elliston Ben	ctb (config.guess)
Free Software Foundation	cph (config.sub)
Guido U Draheim	ctb (ax_check_compile_flag.m4)
Maarten Bosmans	ctb (ax_check_compile_flag.m4)
Christophe Tournayre	ctb (ax_ext.m4)
Michael Petch	ctb (ax_ext.m4, ax_gcc_x86_avx_xgetbv.m4, ax_gcc_x86_cpuid.m4)
Rafael de Lucena Valle	ctb (ax_ext.m4)
Steven G. Johnson	ctb (ax_gcc_x86_cpuid.m4)
Matteo Frigo	ctb (ax_gcc_x86_cpuid.m4)
Scott Pakin	ctb (ax_func_posix_memalign.m4)

Material

NEWS
Reference manual
Package source

macOS

r-release	arm64
r-oldrel	arm64
r-release	x86_64
r-oldrel	x86_64

Windows

r-devel	x86_64
r-release	x86_64
r-oldrel	x86_64

Old Sources

stan4bart archive

Depends

R	≥ 3.5-0
methods
dbarts	≥ 0.9-21

Imports

stats
Matrix
parallel
RcppParallel	≥ 5.1.1

Suggests

testthat	≥ 2.0-0
lme4

LinkingTo

BH	≥ 1.72.0.3
Rcpp	≥ 1.0.5
RcppEigen	≥ 0.3.3.7.0
RcppParallel	≥ 5.1.1
dbarts	≥ 0.9-20

Reverse Suggests

bartCause