CRAN/E | speaq

speaq

Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations

Installation

About

Makes Nuclear Magnetic Resonance spectroscopy (NMR spectroscopy) data analysis as easy as possible by only requiring a small set of functions to perform an entire analysis. 'speaq' offers the possibility of raw spectra alignment and quantitation but also an analysis based on features whereby the spectra are converted to peaks which are then grouped and turned into features. These features can be processed with any number of statistical tools either included in 'speaq' or available elsewhere on CRAN. More details can be found in Vu et al. (2011) doi:10.1186/1471-2105-12-405 and Beirnaert et al. (2018) doi:10.1371/journal.pcbi.1006018.

Key Metrics

Version 2.7.0
R ≥ 3.1.0
Published 2022-05-23 705 days ago
Needs compilation? no
License Apache License 2.0
CRAN checks speaq results

Downloads

Yesterday 48 0%
Last 7 days 94 -15%
Last 30 days 390 -21%
Last 90 days 1.347 -22%
Last 365 days 5.950 -11%

Maintainer

Maintainer

Charlie Beirnaert

charlie_beirnaert@icloud.com

Authors

Charlie Beirnaert
Trung Nghia Vu
Pieter Meysman
Kris Laukens
Dirk Valkenborg

Material

NEWS
Reference manual
Package source

In Views

ChemPhys

Vignettes

classic speaq vignette
speaq 2.0 function illustrations

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

speaq archive

Depends

R ≥ 3.1.0

Imports

MassSpecWavelet
cluster
parallel
doSNOW
data.table
foreach
stats
Rfast
utils
graphics
grDevices
ggplot2
gridExtra
reshape2
rvest
xml2
missForest
impute

Suggests

datasets
knitr
rmarkdown
grid
gridBase

Reverse Imports

AlpsNMR
Rnmr1D

Reverse Suggests

ChemoSpec