CRAN/E | popEpi

popEpi

Functions for Epidemiological Analysis using Population Data

Installation

About

Enables computation of epidemiological statistics, including those where counts or mortality rates of the reference population are used. Currently supported: excess hazard models (Dickman, Sloggett, Hills, and Hakulinen (2012) doi:10.1002/sim.1597), rates, mean survival times, relative/net survival (in particular the Ederer II (Ederer and Heise (1959)) and Pohar Perme (Pohar Perme, Stare, and Esteve (2012) doi:10.1111/j.1541-0420.2011.01640.x) estimators), and standardized incidence and mortality ratios, all of which can be easily adjusted for by covariates such as age. Fast splitting and aggregation of 'Lexis' objects (from package 'Epi') and other computations achieved using 'data.table'.

github.com/FinnishCancerRegistry/popEpi
Bug report File report

Key Metrics

Version 0.4.11
R ≥ 3.2.0
Published 2023-08-23 251 days ago
Needs compilation? no
License MIT
License File
CRAN checks popEpi results
Language en-GB

Downloads

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Maintainer

Maintainer

Joonas Miettinen

joonas.miettinen@cancer.fi

Authors

Joonas Miettinen

cre / aut

Matti Rantanen

aut

Karri Seppa

ctb

Material

README
NEWS
Reference manual
Package source

In Views

Epidemiology

Vignettes

Standardised incidence and mortality ratios
survtab examples

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

popEpi archive

Depends

R ≥ 3.2.0

Imports

data.table ≥ 1.10.4
Epi ≥ 2.0
splines
survival

Suggests

covr
date
knitr
mstate
relsurv
rmarkdown
roxygen2
testthat

Reverse Suggests

Epi