CRAN/E | opalr

opalr

'Opal' Data Repository Client and 'DataSHIELD' Utils

Installation

About

Data integration Web application for biobanks by 'OBiBa'. 'Opal' is the core database application for biobanks. Participant data, once collected from any data source, must be integrated and stored in a central data repository under a uniform model. 'Opal' is such a central repository. It can import, process, validate, query, analyze, report, and export data. 'Opal' is typically used in a research center to analyze the data acquired at assessment centres. Its ultimate purpose is to achieve seamless data-sharing among biobanks. This 'Opal' client allows to interact with 'Opal' web services and to perform operations on the R server side. 'DataSHIELD' administration tools are also provided.

github.com/obiba/opalr/
www.obiba.org/opalr/
www.obiba.org/pages/products/opal/
academic.oup.com/ije/article/46/5/1372/4102813
journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008880
www.datashield.org/
Bug report File report

Key Metrics

Version 3.4.1
R ≥ 3.1
Published 2024-01-10 117 days ago
Needs compilation? no
License GPL-3
CRAN checks opalr results

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Maintainer

Maintainer

Yannick Marcon

yannick.marcon@obiba.org

Authors

Yannick Marcon

aut / cre

Amadou Gaye

ctb

OBiBa group

cph

Material

README
Reference manual
Package source

Vignettes

DataSHIELD Administration
Opal Files
Opal Projects
Opal R Session

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

opalr archive

Depends

R ≥ 3.1
httr

Imports

jsonlite
readr
mime
progress
labelled
tibble

Suggests

e1071
knitr
knitrBootstrap
rmarkdown
testthat

Reverse Depends

DSOpal

Reverse Imports

mlstrOpalr