CRAN/E | mnmer

mnmer

'(m,n)-mer' - A Simple Statistical Feature for Sequence Classification

Installation

About

The (m,n)-mer is a statistical feature calculated from conditional frequency distributions obtained from a FASTA file. The resulting table, along with class information, is used to create the classification feature matrix. For more information on this method and its benchmarking results, refer to Andrade et al.'s upcoming publication titled "(m,n)-mer - A Simple Statistical Feature for Sequence Classification".

Key Metrics

Version 0.99.1
R ≥ 4.1.0
Published 2023-05-12 359 days ago
Needs compilation? yes
License Artistic-2.0
CRAN checks mnmer results

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Maintainer

Maintainer

Amanda Andrade

aandradebio@gmail.com

Authors

Amanda Andrade

cre / aut

Marco Grivet

aut

Otavio Brustolini

aut

Ana Vasconcelos

aut / ths

Material

README
NEWS
Reference manual
Package source

Vignettes

(m,n)-mer - A Simple Statistical Feature for Sequence Classification

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-develnot available

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Depends

R ≥ 4.1.0
utils
Biostrings

Suggests

BiocStyle
covr
knitr
rmarkdown
testthat ≥ 3.0.0
caret
MLeval
randomForest

LinkingTo

cpp11