CRAN/E | metan

metan

Multi Environment Trials Analysis

Installation

About

Performs stability analysis of multi-environment trial data using parametric and non-parametric methods. Parametric methods includes Additive Main Effects and Multiplicative Interaction (AMMI) analysis by Gauch (2013) doi:10.2135/cropsci2013.04.0241, Ecovalence by Wricke (1965), Genotype plus Genotype-Environment (GGE) biplot analysis by Yan & Kang (2003) doi:10.1201/9781420040371, geometric adaptability index by Mohammadi & Amri (2008) doi:10.1007/s10681-007-9600-6, joint regression analysis by Eberhart & Russel (1966) doi:10.2135/cropsci1966.0011183X000600010011x, genotypic confidence index by Annicchiarico (1992), Murakami & Cruz's (2004) method, power law residuals (POLAR) statistics by Doring et al. (2015) doi:10.1016/j.fcr.2015.08.005, scale-adjusted coefficient of variation by Doring & Reckling (2018) doi:10.1016/j.eja.2018.06.007, stability variance by Shukla (1972) doi:10.1038/hdy.1972.87, weighted average of absolute scores by Olivoto et al. (2019a) doi:10.2134/agronj2019.03.0220, and multi-trait stability index by Olivoto et al. (2019b) doi:10.2134/agronj2019.03.0221. Non-parametric methods includes superiority index by Lin & Binns (1988) doi:10.4141/cjps88-018, nonparametric measures of phenotypic stability by Huehn (1990) , TOP third statistic by Fox et al. (1990) doi:10.1007/BF00040364. Functions for computing biometrical analysis such as path analysis, canonical correlation, partial correlation, clustering analysis, and tools for inspecting, manipulating, summarizing and plotting typical multi-environment trial data are also provided.

Citation metan citation info
github.com/TiagoOlivoto/metan
Bug report File report

Key Metrics

Version 1.18.0
R ≥ 4.1.0
Published 2023-03-05 418 days ago
Needs compilation? no
License GPL-3
CRAN checks metan results
Language en-US

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Maintainer

Maintainer

Tiago Olivoto

tiagoolivoto@gmail.com

Authors

Tiago Olivoto

aut / cre / cph

Material

NEWS
Reference manual
Package source

In Views

Agriculture

Vignettes

Multi-environment Trial Analysis

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

metan archive

Depends

R ≥ 4.1.0

Imports

dplyr ≥ 1.0.0
GGally
ggforce
ggplot2 ≥ 3.3.0
ggrepel
lme4
lmerTest
magrittr
mathjaxr
methods
patchwork
purrr
rlang ≥ 0.4.11
tibble
tidyr
tidyselect ≥ 1.0.0

Suggests

DT
knitr
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roxygen2
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