CRAN/E | jaatha

jaatha

Simulation-Based Maximum Likelihood Parameter Estimation

Installation

About

An estimation method that can use computer simulations to approximate maximum-likelihood estimates even when the likelihood function can not be evaluated directly. It can be applied whenever it is feasible to conduct many simulations, but works best when the data is approximately Poisson distributed. It was originally designed for demographic inference in evolutionary biology (Naduvilezhath et al., 2011 doi:10.1111/j.1365-294X.2011.05131.x, Mathew et al., 2013 doi:10.1002/ece3.722). It has optional support for conducting coalescent simulation using the 'coala' package.

Citation jaatha citation info
github.com/statgenlmu/jaatha
Bug report File report

Key Metrics

Version 3.2.5
R ≥ 3.0
Published 2024-01-08 116 days ago
Needs compilation? no
License GPL (≥ 3)
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Maintainer

Maintainer

Dirk Metzler

metzler@bio.lmu.de

Authors

Paul Staab

aut

Lisha Mathew

aut

Dirk Metzler

aut / ths / cre

Material

README
NEWS
Reference manual
Package source

Vignettes

Using Jaatha for Demographic Inference
Introduction to Jaatha

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

jaatha archive

Depends

R ≥ 3.0

Imports

assertthat ≥ 0.1
R6 ≥ 2.1.1
parallel
stats
utils

Suggests

boot ≥ 1.3-10
coala ≥ 0.2.1
knitr
rmarkdown
testthat ≥ 0.11.0