CRAN/E | hybridModels

hybridModels

An R Package for the Stochastic Simulation of Disease Spreading in Dynamic Networks

Installation

About

Simulates stochastic hybrid models for transmission of infectious diseases in dynamic networks. It is a metapopulation model in which each node in the network is a sub-population and disease spreads within nodes and among them, combining two approaches: stochastic simulation algorithm (doi:10.1146/annurev.physchem.58.032806.104637) and individual-based approach, respectively. Equations that models spread within nodes are customizable and there are two link types among nodes: migration and influence (commuting). More information in Fernando S. Marques, Jose H. H. Grisi-Filho, Marcos Amaku et al. (2020) doi:10.18637/jss.v094.i06.

Citation hybridModels citation info
github.com/fernandosm/hybridModels
Bug report File report

Key Metrics

Version 0.3.7
R ≥ 3.3.1
Published 2020-06-26 1400 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks hybridModels results

Downloads

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Maintainer

Maintainer

Fernando S. Marques

fernandosix@gmail.com

Authors

Fernando S. Marques

aut / cre

Jose H. H. Grisi-Filho

aut

Marcos Amaku

aut

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

hybridModels archive

Depends

R ≥ 3.3.1

Imports

doParallel
doRNG
foreach
ggplot2
GillespieSSA
parallel
reshape2
stats
stringr
grid