CRAN/E | growthcurver

growthcurver

Simple Metrics to Summarize Growth Curves

Installation

About

Fits the logistic equation to microbial growth curve data (e.g., repeated absorbance measurements taken from a plate reader over time). From this fit, a variety of metrics are provided, including the maximum growth rate, the doubling time, the carrying capacity, the area under the logistic curve, and the time to the inflection point. Method described in Sprouffske and Wagner (2016) doi:10.1186/s12859-016-1016-7.

github.com/sprouffske/growthcurver
Bug report File report

Key Metrics

Version 0.3.1
R ≥ 4.0
Published 2020-10-19 1292 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks growthcurver results

Downloads

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Maintainer

Maintainer

Kathleen Sprouffske

sprouffske@gmail.com

Authors

Kathleen Sprouffske

aut / cre

Material

README
Reference manual
Package source

Vignettes

Using growthcurver

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

growthcurver archive

Depends

R ≥ 4.0

Imports

minpack.lm ≥ 1.2
stats ≥ 4.0
graphics ≥ 4.0
grDevices ≥ 4.0

Suggests

testthat
knitr
dplyr
ggplot2
rmarkdown