CRAN/E | glinvci

glinvci

Phylogenetic Comparative Methods with Uncertainty Estimates

Installation

About

A framework for analytically computing the asymptotic confidence intervals and maximum-likelihood estimates of a class of continuous-time Gaussian branching processes defined by Mitov V, Bartoszek K, Asimomitis G, Stadler T (2019) doi:10.1016/j.tpb.2019.11.005. The class of model includes the widely used Ornstein-Uhlenbeck and Brownian motion branching processes. The framework is designed to be flexible enough so that the users can easily specify their own sub-models, or re-parameterizations, and obtain the maximum-likelihood estimates and confidence intervals of their own custom models.

git.sr.ht/~hckiang/glinvci
github.com/hckiang/glinvci

Key Metrics

Version 1.2.2
R ≥ 3.3.0
Published 2023-12-10 141 days ago
Needs compilation? yes
License GPL-3
CRAN checks glinvci results

Downloads

Yesterday 6 0%
Last 7 days 125 -11%
Last 30 days 385 +19%
Last 90 days 1.014 -17%
Last 365 days 3.990 +23%

Maintainer

Maintainer

Hao Chi Kiang

hello@hckiang.com

Authors

Hao Chi Kiang

cre / aut

Material

README
Reference manual
Package source

Vignettes

Getting Started with GLinvCI

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

glinvci archive

Depends

R ≥ 3.3.0

Imports

optimx
lbfgsb3c
BB
ape
numDeriv
plyr
rlang
generics
utils
stats

Suggests

testthat