CRAN/E | ensembleTax

ensembleTax

Ensemble Taxonomic Assignments of Amplicon Sequencing Data

Installation

About

Creates ensemble taxonomic assignments of amplicon sequencing data in R using outputs of multiple taxonomic assignment algorithms and/or reference databases. Includes flexible algorithms for mapping taxonomic nomenclatures onto one another and for computing ensemble taxonomic assignments.

Key Metrics

Version 1.1.1
R ≥ 2.10
Published 2021-05-21 1079 days ago
Needs compilation? no
License MIT
License File
CRAN checks ensembleTax results

Downloads

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Maintainer

Maintainer

Dylan Catlett

dcat4444@gmail.com

Authors

Dylan Catlett

aut / cre

Kevin Son

ctb

Connie Liang

ctb

Material

Reference manual
Package source

Vignettes

assign.ensembleTax tutorial
ensembleTax package vignette
taxmapper tutorial

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

ensembleTax archive

Depends

R ≥ 2.10

Imports

dplyr
Biostrings
DECIPHER
stringr
ggplot2
reshape2
usethis

Suggests

knitr
rmarkdown
markdown