CRAN/E | densityClust

densityClust

Clustering by Fast Search and Find of Density Peaks

Installation

About

An improved implementation (based on k-nearest neighbors) of the density peak clustering algorithm, originally described by Alex Rodriguez and Alessandro Laio (Science, 2014 vol. 344). It can handle large datasets (> 100,000 samples) very efficiently. It was initially implemented by Thomas Lin Pedersen, with inputs from Sean Hughes and later improved by Xiaojie Qiu to handle large datasets with kNNs.

github.com/thomasp85/densityClust
Bug report File report

Key Metrics

Version 0.3.3
Published 2024-01-29 90 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks densityClust results

Downloads

Yesterday 67 0%
Last 7 days 358 -37%
Last 30 days 1.704 -17%
Last 90 days 5.979 +122%
Last 365 days 14.626 -30%

Maintainer

Maintainer

Thomas Lin Pedersen

thomasp85@gmail.com

Authors

Thomas Lin Pedersen

aut / cre

Sean Hughes

aut

Xiaojie Qiu

aut

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

densityClust archive

Imports

FNN
ggplot2
ggrepel
grDevices
gridExtra
RColorBrewer
Rtsne

Suggests

covr
testthat

LinkingTo

cpp11

Reverse Suggests

FCPS