CRAN/E | chillR

chillR

Statistical Methods for Phenology Analysis in Temperate Fruit Trees

Installation

About

The phenology of plants (i.e. the timing of their annual life phases) depends on climatic cues. For temperate trees and many other plants, spring phases, such as leaf emergence and flowering, have been found to result from the effects of both cool (chilling) conditions and heat. Fruit tree scientists (pomologists) have developed some metrics to quantify chilling and heat (e.g. see Luedeling (2012) doi:10.1016/j.scienta.2012.07.011). 'chillR' contains functions for processing temperature records into chilling (Chilling Hours, Utah Chill Units and Chill Portions) and heat units (Growing Degree Hours). Regarding chilling metrics, Chill Portions are often considered the most promising, but they are difficult to calculate. This package makes it easy. 'chillR' also contains procedures for conducting a PLS analysis relating phenological dates (e.g. bloom dates) to either mean temperatures or mean chill and heat accumulation rates, based on long-term weather and phenology records (Luedeling and Gassner (2012) doi:10.1016/j.agrformet.2011.10.020). As of version 0.65, it also includes functions for generating weather scenarios with a weather generator, for conducting climate change analyses for temperature-based climatic metrics and for plotting results from such analyses. Since version 0.70, 'chillR' contains a function for interpolating hourly temperature records.

Key Metrics

Version 0.75
R ≥ 3.5.0
Published 2023-11-27 151 days ago
Needs compilation? yes
License GPL-3
CRAN checks chillR results

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Maintainer

Maintainer

Eike Luedeling

eike@eikeluedeling.com

Authors

Eike Luedeling

aut / cre

Lars Caspersen

aut

Eduardo Fernandez

aut

Material

README
Reference manual
Package source

Vignettes

PhenoFlex
Producing hourly temperature records for agroclimatic analysis

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

chillR archive

Depends

R ≥ 3.5.0

Imports

assertthat
dplyr
ecmwfr
fields
GenSA
ggplot2
graphics
grDevices
httr
jsonlite
Kendall
lubridate
magrittr
metR
patchwork
pls
plyr
progress
purrr
R.utils
raster
Rcpp
RCurl
readxl
reshape2
rlang
RMAWGEN
scales
stats
stringr
tidyr
utils
XML

Suggests

knitr
rmarkdown
testthat

LinkingTo

Rcpp

Reverse Imports

decisionSupport

Reverse Suggests

ChillModels