CRAN/E | bartBMA

bartBMA

Bayesian Additive Regression Trees using Bayesian Model Averaging

Installation

About

"BART-BMA Bayesian Additive Regression Trees using Bayesian Model Averaging" (Hernandez B, Raftery A.E., Parnell A.C. (2018) doi:10.1007/s11222-017-9767-1) is an extension to the original BART sum-of-trees model (Chipman et al 2010). BART-BMA differs to the original BART model in two main aspects in order to implement a greedy model which will be computationally feasible for high dimensional data. Firstly BART-BMA uses a greedy search for the best split points and variables when growing decision trees within each sum-of-trees model. This means trees are only grown based on the most predictive set of split rules. Also rather than using Markov chain Monte Carlo (MCMC), BART-BMA uses a greedy implementation of Bayesian Model Averaging called Occam's Window which take a weighted average over multiple sum-of-trees models to form its overall prediction. This means that only the set of sum-of-trees for which there is high support from the data are saved to memory and used in the final model.

Key Metrics

Version 1.0
Published 2020-03-13 1505 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks bartBMA results

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Maintainer

Maintainer

Belinda Hernandez

HERNANDB@tcd.ie

Authors

Belinda Hernandez

aut / cre

Adrian E. Raftery

aut

Stephen R Pennington

aut

Andrew C. Parnell

aut

Eoghan O'Neill

ctb

Material

README
Reference manual
Package source

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Bayesian

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Imports

Rcpp ≥ 1.0.0
mvnfast
Rdpack

LinkingTo

Rcpp
RcppArmadillo
BH