CRAN/E | allofus

allofus

Interface for 'All of Us' Researcher Workbench

Installation

About

Streamline use of the 'All of Us' Researcher Workbench ()with tools to extract and manipulate data from the 'All of Us' database. Increase interoperability with the Observational Health Data Science and Informatics ('OHDSI') tool stack by decreasing reliance of 'All of Us' tools and allowing for cohort creation via 'Atlas'. Improve reproducible and transparent research using 'All of Us'.

Citation allofus citation info
roux-ohdsi.github.io/allofus/
github.com/roux-ohdsi/allofus
Bug report File report

Key Metrics

Version 1.1.0
R ≥ 2.10
Published 2024-04-04 23 days ago
Needs compilation? no
License MIT
License File
CRAN checks allofus results

Downloads

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Maintainer

Maintainer

Rob Cavanaugh

r.cavanaugh@northeastern.edu

Authors

Louisa Smith

aut / cph

Rob Cavanaugh

aut / cre / cph

Material

README
NEWS
Reference manual
Package source

Vignettes

All of Us in R
Using ATLAS to create a cohort
Extracting All of Us survey and EHR data
Managing files on the workbench

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

allofus archive

Depends

R ≥ 2.10

Imports

cli
tidyr
magrittr
dplyr ≥ 1.1.4
glue
bigrquery ≥1.5.1
purrr
stats
utils
dbplyr ≥ 2.5.0
sessioninfo
rlang
stringr
DBI
lifecycle
bit64

Suggests

knitr
rmarkdown
testthat ≥ 3.0.0
kableExtra
DT
googlesheets4
tibble
forcats
gh
SqlRender ≥ 1.6.0