CRAN/E | SpiceFP

SpiceFP

Sparse Method to Identify Joint Effects of Functional Predictors

Installation

About

A set of functions allowing to implement the 'SpiceFP' approach which is iterative. It involves transformation of functional predictors into several candidate explanatory matrices (based on contingency tables), to which relative edge matrices with contiguity constraints are associated. Generalized Fused Lasso regression are performed in order to identify the best candidate matrix, the best class intervals and related coefficients at each iteration. The approach is stopped when the maximal number of iterations is reached or when retained coefficients are zeros. Supplementary functions allow to get coefficients of any candidate matrix or mean of coefficients of many candidates. The methods in this package are describing in Girault Gnanguenon Guesse, Patrice Loisel, Bénedicte Fontez, Thierry Simonneau, Nadine Hilgert (2021) "An exploratory penalized regression to identify combined effects of functional variables -Application to agri-environmental issues" .

Key Metrics

Version 0.1.2
R ≥ 3.6.0
Published 2023-06-01 334 days ago
Needs compilation? no
License GPL-3
CRAN checks SpiceFP results

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Maintainer

Maintainer

Girault Gnanguenon Guesse

girault.gnanguenon@gmail.com

Authors

Girault Gnanguenon Guesse

aut / cre

Patrice Loisel

aut

Benedicte Fontez

aut

Nadine Hilgert

aut

Thierry Simonneau

ctr

Isabelle Sanchez

ctr

Material

README
Reference manual
Package source

Vignettes

2021SpiceFP

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-develnot available

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Old Sources

SpiceFP archive

Depends

R ≥ 3.6.0

Imports

doParallel
foreach
stringr
tidyr
Matrix
genlasso
purrr

Suggests

fields