CRAN/E | Rtapas

Rtapas

Random Tanglegram Partitions

Installation

About

Applies a given global-fit method to random partial tanglegrams of a fixed size to identify the associations, terminals, and nodes that maximize phylogenetic (in)congruence. It also includes functions to compute more easily the confidence intervals of classification metrics and plot results, reducing computational time. See Llaberia-Robledillo et al. (2022, doi:10.1101/2022.05.17.492291).

Key Metrics

Version 1.1
R ≥ 3.5.0
Published 2022-09-28 431 days ago
Needs compilation? no
License MIT
License File
CRAN checks Rtapas results

Downloads

Last 24 hours 7 -50%
Last 7 days 43 +65%
Last 30 days 157 -9%
Last 90 days 464 -3%
Last 365 days 1.973 +78%

Maintainer

Maintainer

Mar Llaberia-Robledillo

mar.llaberia@uv.es

Authors

Mar Llaberia-Robledillo

aut / cre / cph

Juan A. Balbuena

aut / cph

José Ignacio Lucas-Lledó

aut / cph

Oscar Alejandro Pérez-Escobar

aut / cph

Material

README
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrelnot available

x86_64

Old Sources

Rtapas archive

Depends

phytools
parallel
R ≥ 3.5.0

Imports

ape
distory
GiniWegNeg
paco
stats
vegan
stringr
parallelly

Suggests

testthat ≥ 3.0.0