CRAN/E | RUVIIIC

RUVIIIC

RUV-III-C

Installation

About

Variations of Remove Unwanted Variation-III (RUV-III) known as RUV-III-C (RUV-III Complete). RUV-III performs normalisation using negative control variables and replication. RUV-III-C extends this method to cases where the data contains missing values, by applying RUV-III to complete subsets of the data. Originally designed for SWATH-MS proteomics datasets. Poulos et al. (2020) doi:10.1038/s41467-020-17641-3.

System requirements C++11

Key Metrics

Version 1.0.19
R ≥ 3.5
Published 2021-04-23 1099 days ago
Needs compilation? yes
License MIT
License File
CRAN checks RUVIIIC results

Downloads

Yesterday 4 0%
Last 7 days 8 -11%
Last 30 days 42 -18%
Last 90 days 136 -60%
Last 365 days 1.439 -38%

Maintainer

Maintainer

Rohan Shah

rshah@cmri.org.au

Authors

Rohan Shah

aut / cre

Sean Peters

ctb

Qing Zhong

ctb

Children's Medical Research Institute

cph

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

RUVIIIC archive

Depends

R ≥ 3.5
RSpectra
progress

Suggests

ruv
testthat

LinkingTo

Rcpp
RcppEigen
RSpectra
RcppProgress