CRAN/E | PepSAVIms

PepSAVIms

PepSAVI-MS Data Analysis

Installation

About

An implementation of the data processing and data analysis portion of a pipeline named the PepSAVI-MS which is currently under development by the Hicks laboratory at the University of North Carolina. The statistical analysis package presented herein provides a collection of software tools used to facilitate the prioritization of putative bioactive peptides from a complex biological matrix. Tools are provided to deconvolute mass spectrometry features into a single representation for each peptide charge state, filter compounds to include only those possibly contributing to the observed bioactivity, and prioritize these remaining compounds for those most likely contributing to each bioactivity data set.

github.com/dpritchLibre/PepSAVIms
Bug report File report

Key Metrics

Version 0.9.1
R ≥ 3.0.0
Published 2016-12-17 2694 days ago
Needs compilation? no
License CC BY-NC-SA 4.0
CRAN checks PepSAVIms results

Downloads

Yesterday 9 0%
Last 7 days 42 -37%
Last 30 days 160 +11%
Last 90 days 399 -37%
Last 365 days 1.852 -25%

Maintainer

Maintainer

Pritchard David

dpritch@live.unc.edu

Authors

Pritchard David

aut / cre

Kirkpatrick Christine

aut

Material

README
NEWS
Reference manual
Package source

Vignettes

Kirkpatrick et al. (2016) data analysis
PepSAVIms introduction

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

PepSAVIms archive

Depends

R ≥ 3.0.0

Imports

elasticnet

Suggests

testthat
knitr