CRAN/E | PAC

PAC

Partition-Assisted Clustering and Multiple Alignments of Networks

Installation

About

Implements partition-assisted clustering and multiple alignments of networks. It 1) utilizes partition-assisted clustering to find robust and accurate clusters and 2) discovers coherent relationships of clusters across multiple samples. It is particularly useful for analyzing single-cell data set. Please see Li et al. (2017) doi:10.1371/journal.pcbi.1005875 for detail method description.

doi.org/10.1371/journal.pcbi.1005875
System requirements C++11

Key Metrics

Version 1.1.4
Published 2021-02-18 1169 days ago
Needs compilation? yes
License GPL-3
CRAN checks PAC results

Downloads

Yesterday 10 0%
Last 7 days 73 -22%
Last 30 days 314 -2%
Last 90 days 921 -18%
Last 365 days 4.205 +3%

Maintainer

Maintainer

Ye Henry Li

hlowl2@gmail.com

Authors

Ye Henry Li
Dangna Li

Material

Reference manual
Package source

Vignettes

Using the PAC package

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

PAC archive

Imports

Rcpp ≥ 0.12.2
igraph
parmigene
infotheo
dplyr
Rtsne
ggplot2
ggrepel

Suggests

knitr
rmarkdown

LinkingTo

Rcpp