CRAN/E | MetaNet

MetaNet

Network Analysis for Omics Data

Installation

About

Comprehensive network analysis package. Calculate correlation network fastly, accelerate lots of analysis by parallel computing. Support for multi-omics data, search sub-nets fluently. Handle bigger data, more than 10,000 nodes in each omics. Offer various layout method for multi-omics network and some interfaces to other software ('Gephi', 'Cytoscape', 'ggplot2'), easy to visualize. Provide comprehensive topology indexes calculation, including ecological network stability.

github.com/Asa12138/MetaNet
Bug report File report

Key Metrics

Version 0.1.0
R ≥ 4.1.0
Published 2024-01-12 108 days ago
Needs compilation? no
License GPL-3
CRAN checks MetaNet results

Downloads

Yesterday 8 0%
Last 7 days 61 -24%
Last 30 days 275 +88%
Last 90 days 515 +65%
Last 365 days 811

Maintainer

Maintainer

Peng Chen

pengchen2001@zju.edu.cn

Authors

Peng Chen

aut / cre

Material

README
Reference manual
Package source

Vignettes

MetaNet

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-develnot available

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Depends

R ≥ 4.1.0
igraph ≥ 1.3.5

Imports

graphics
dplyr
ggplot2 ≥ 3.2.0
grDevices
magrittr
reshape2
stats
tibble
utils
pcutils
vegan
rlang
stringr

Suggests

pheatmap
foreach
doSNOW
snow
ggrepel
ggpubr
RColorBrewer
knitr
rmarkdown
prettydoc
Hmisc
gifski
ggnewscale
ggraph
networkD3
ggpmisc
ggtree
treeio
circlize