CRAN/E | MACER

MACER

Molecular Acquisition, Cleaning, and Evaluation in R 'MACER'

Installation

About

To assist biological researchers in assembling taxonomically and marker focused molecular sequence data sets. 'MACER' accepts a list of genera as a user input and uses NCBI-GenBank and BOLD as resources to download and assemble molecular sequence datasets. These datasets are then assembled by marker, aligned, trimmed, and cleaned. The use of this package allows the publication of specific parameters to ensure reproducibility. The 'MACER' package has four core functions and an example run through using all of these functions can be found in the associated repository .

<github.com/rgyoung6/MACER>

Key Metrics

Version 0.2.1
Published 2022-12-02 518 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks MACER results
Language en-GB

Downloads

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Maintainer

Maintainer

Robert G Young

rgyoung6@gmail.com

Authors

Robert G Young

aut / cre / cph

Rekkab Gill

aut

Daniel Gillis

aut

Robert H Hanner

aut / cph

Material

README
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

MACER archive

Imports

rentrez
ape
httr
stats
utils
ggplot2
parallel
pbapply
grDevices
png