CRAN/E | GxEScanR

GxEScanR

Run GWAS/GWEIS Scans Using Binary Dosage Files

Installation

About

Tools to run genome-wide association study (GWAS) and genome-wide by environment interaction study (GWEIS) scans using the genetic data stored in a binary dosage file. The user provides a data frame with the subject's covariate data and the information about the binary dosage file returned by the BinaryDosage::getbdinfo() routine.

Key Metrics

Version 2.0.2
Published 2020-10-02 1305 days ago
Needs compilation? yes
License GPL-3
CRAN checks GxEScanR results
Language en-US

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Maintainer

Maintainer

John Morrison

jmorr@usc.edu

Authors

John Morrison

aut / cre

NCI

fnd

(CA196559)

NCI

fnd

(CA201407)

NIEHS

fnd

(ES007048)

NHLBI

fnd

(HL115606)

Material

NEWS
Reference manual
Package source

Vignettes

Using GxEScanR

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

GxEScanR archive

Imports

Rcpp ≥ 1.0.4
prodlim

Suggests

BinaryDosage
testthat ≥ 2.1.0
covr
knitr
rmarkdown

LinkingTo

Rcpp
RcppArmadillo