CRAN/E | GEVACO

GEVACO

Joint Test of Gene and GxE Interactions via Varying Coefficients

Installation

About

A novel statistical model to detect the joint genetic and dynamic gene-environment (GxE) interaction with continuous traits in genetic association studies. It uses varying-coefficient models to account for different GxE trajectories, regardless whether the relationship is linear or not. The package includes one function, GxEtest(), to test a single genetic variant (e.g., a single nucleotide polymorphism or SNP), and another function, GxEscreen(), to test for a set of genetic variants. The method involves a likelihood ratio test described in Crainiceanu, C. M., and Ruppert, D. (2004) doi:10.1111/j.1467-9868.2004.00438.x.

Key Metrics

Version 1.0.1
R ≥ 3.6
Published 2021-12-10 876 days ago
Needs compilation? no
License GPL-3
CRAN checks GEVACO results

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Maintainer

Maintainer

Sydney Manning

sydney.manning@unthsc.edu

Authors

Zhengyang Zhou

aut

Sydney Manning

aut / cre

Chao Xing

aut

Hung-Chih Ku

aut

Material

Reference manual
Package source

Vignettes

GEVACO Introduction

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

GEVACO archive

Depends

R ≥ 3.6

Imports

nlme
RLRsim
stats

Suggests

rmarkdown
knitr