CRAN/E | DetSel

DetSel

A Computer Program to Detect Markers Responding to Selection

Installation

About

In the new era of population genomics, surveys of genetic polymorphism ("genome scans") offer the opportunity to distinguish locus-specific from genome wide effects at many loci. Identifying presumably neutral regions of the genome that are assumed to be influenced by genome-wide effects only, and excluding presumably selected regions, is therefore critical to infer population demography and phylogenetic history reliably. Conversely, detecting locus-specific effects may help identify those genes that have been, or still are, targeted by natural selection. The software package DetSel has been developed to identify markers that show deviation from neutral expectation in pairwise comparisons of diverging populations.

Key Metrics

Version 1.0.4
R ≥ 2.15
Published 2020-02-17 1524 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks DetSel results

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Maintainer

Maintainer

Renaud Vitalis

renaud.vitalis@inrae.fr

Authors

Renaud Vitalis.

Material

ChangeLog
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

DetSel archive

Depends

R ≥ 2.15

Imports

ash