CRAN/E | BeastJar

BeastJar

JAR Dependency for MCMC Using 'BEAST'

Installation

About

Provides JAR to perform Markov chain Monte Carlo (MCMC) inference using the popular Bayesian Evolutionary Analysis by Sampling Trees 'BEAST' software library of Suchard et al (2018) doi:10.1093/ve/vey016. 'BEAST' supports auto-tuning Metropolis-Hastings, slice, Hamiltonian Monte Carlo and Sequential Monte Carlo sampling for a large variety of composable standard and phylogenetic statistical models using high performance computing. By placing the 'BEAST' JAR in this package, we offer an efficient distribution system for 'BEAST' use by other R packages using CRAN.

github.com/beast-dev/BeastJar
Copyright See file COPYRIGHTS BeastJar copyright details
System requirements Java (>= 1.8)

Key Metrics

Version 1.10.6
Published 2020-10-26 1285 days ago
Needs compilation? no
License Apache License 2.0
CRAN checks BeastJar results

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Maintainer

Maintainer

Marc A. Suchard

msuchard@ucla.edu

Authors

Marc A. Suchard

aut / cre / cph

Andrew Rambaut

cph

Alexei J. Drummond

cph

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

BeastJar archive

Imports

rJava

Suggests

testthat