CRAN/E | simPATHy

simPATHy

A Method for Simulating Data from Perturbed Biological Pathways

Installation

About

Simulate data from a Gaussian graphical model or a Gaussian Bayesian network in two conditions. Given a covariance matrix of a reference condition simulate plausible disregulations. See Salviato et al. (2017) doi:10.1093/bioinformatics/btw642.

Key Metrics

Version 0.6
R ≥ 3.0
Published 2021-11-23 884 days ago
Needs compilation? no
License AGPL-3
CRAN checks simPATHy results

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Maintainer

Maintainer

Elisa Salviato

elisa.salviato.88@gmail.com

Authors

Elisa Salviato

aut / cre

Vera Djordjilovic

aut

Chiara Romualdi

aut

Monica Chiogna

aut

Material

Reference manual
Package source

Vignettes

simPATHy

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

simPATHy archive

Depends

R ≥ 3.0

Imports

mvtnorm
gRbase
graph
igraph
ggm
qpgraph
R.utils
htmlwidgets
shiny
shinydashboard
grDevices
graphics

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