CRAN/E | palmid

palmid

RdRP Analysis Suite

Installation

About

R Analysis suite for viral RNA dependent RNA polymerase (RdRP). Statistical and meta-data analysis of 'palmscan' output and 'palmDB'/ 'DIAMOND' alignment files. Cross reference an input RNA virus against 145,000 RdRP identified in the Serratus project.

serratus.io/palmid
Bug report File report

Key Metrics

Version 0.0.3
R ≥ 3.5.0
Published 2021-10-15 917 days ago
Needs compilation? no
License AGPL-3
CRAN checks palmid results

Downloads

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Last 7 days 14 -30%
Last 30 days 73 0%
Last 90 days 278 +25%
Last 365 days 1.498 -39%

Maintainer

Maintainer

Artem Babaian

artem@rRNA.ca

Authors

Artem Babaian

aut / cre

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.5.0
dplyr
ggplot2 ≥ 3.3.3

Imports

dbplyr
downloadthis
DBI
DT
ggplotify
ggwordcloud
ggExtra
grDevices
gridExtra ≥ 2.3
htmltools
htmlwidgets
leaflet
methods
plotly
rmarkdown
RPostgreSQL
scales
stats
utils
viridisLite

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