CRAN/E | bcTSNE

bcTSNE

Projected t-SNE for Batch Correction

Installation

About

Implements the projected t-SNE method for batch correction of high-dimensional data. Please see Aliverti et al. (2020) doi:10.1093/bioinformatics/btaa189 for more information.

Citation bcTSNE citation info
github.com/emanuelealiverti/BC_tSNE
System requirements GNU make

Key Metrics

Version 0.11.1
Published 2021-12-01 871 days ago
Needs compilation? yes
License GPL-3
CRAN checks bcTSNE results

Downloads

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Maintainer

Maintainer

Dayne L Filer

dayne.filer@gmail.com

Authors

Dayne L Filer

aut / cre

Emanuele Aliverti

aut

Jeff Tilson

aut

Kirk C Wilhelmsen

aut

David B Dunson

aut

Material

Reference manual
Package source

Additional repos

daynefiler.github.io/drat

Vignettes

Simulation Experiment

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

bcTSNE archive

Imports

stats
RSpectra
utils
Rtsne
graphics
splatter

Suggests

data.table
batchelor
kBET
scater
knitr
lisi
harmony
dlfUtils
xtable