CRAN/E | bbsBayes

bbsBayes

Hierarchical Bayesian Analysis of North American BBS Data

Installation

About

The North American Breeding Bird Survey (BBS) is a long-running program that seeks to monitor the status and trends of the breeding birds in North America. Since its start in 1966, the BBS has accumulated over 50 years of data for over 500 species of North American Birds. Given the temporal and spatial structure of the data, hierarchical Bayesian models are used to assess the status and trends of these 500+ species of birds. 'bbsBayes' allows you to perform hierarchical Bayesian analysis of BBS data. You can run a full model analysis for one or more species that you choose, or you can take more control and specify how the data should be stratified, prepared for 'JAGS', or modelled. The functions provided here allow you to replicate analyses performed by the United State Geological Survey (USGS, see Link and Sauer (2011) doi:10.1525/auk.2010.09220) and Canadian Wildlife Service (CWS, see Smith and Edwards (2020) doi:10.1101/2020.03.26.010215).

Citation bbsBayes citation info
github.com/bbsBayes/bbsBayes
System requirements JAGS 4.3.0 (https://sourceforge.net/projects/mcmc-jags/)

Key Metrics

Version 2.5.3
R ≥ 3.5
Published 2023-02-27 396 days ago
Needs compilation? no
License MIT
License File
CRAN checks bbsBayes results

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Maintainer

Maintainer

Brandon P.M. Edwards

brandonedwards3@cmail.carleton.ca

Authors

Brandon P.M. Edwards

aut / cre

Adam C. Smith

aut

Material

README
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

bbsBayes archive

Depends

R ≥ 3.5

Imports

progress
jagsUI
ggrepel
geofacet
ggplot2
stringr
grDevices
dplyr
sf
tools
rappdirs
sbtools
mgcv