CRAN/E | MACP

MACP

Macromolecular Assemblies from Co-Elution Profile (MACP)

Installation

About

The MACP employs machine learning algorithm for automated scoring of co-fractionation mass spectrometry (CF-MS) and then systematically map multi-protein complexes from these high-confidence protein-protein interactions (PPIs) using unsupervised learning (i.e., clustering).

github.com/mrbakhsh/MACP
Bug report File report

Key Metrics

Version 0.1.0
R ≥ 4.1
Published 2023-02-28 416 days ago
Needs compilation? no
License BSD_3_clause
License File
CRAN checks MACP results

Downloads

Yesterday 9
Last 7 days 16 -16%
Last 30 days 116 -3%
Last 90 days 526 +31%
Last 365 days 1.701 +412%

Maintainer

Maintainer

Matineh Rahmatbakhsh

matinerb.94@gmail.com

Authors

Matineh Rahmatbakhsh

aut / trl / cre

Mohan Babu

led

Material

README
Reference manual
Package source

Vignettes

Introduction to *MACP* package for Macromolecular Assemblies from Co-elution Profile (MACP)

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-develnot available

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Depends

R ≥ 4.1

Imports

stats
zoo
utils
dplyr
lsa
WGCNA
tidyr
tibble
Hmisc
igraph
PRROC
pROC
ggplot2
grDevices
fmsb
stringr
caret

Suggests

knitr
ptw
e1071
kernlab
ranger
proxy
infotheo
gridExtra
philentropy
randomForest
gprofiler2
purrr
minet
entropy
MCL
orthogene
protti
arules
rmarkdown
BiocStyle