CRAN/E | ExomeDepth

ExomeDepth

Calls Copy Number Variants from Targeted Sequence Data

Installation

About

Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.

Key Metrics

Version 1.1.15
R ≥ 3.4.0
Published 2020-01-09 1568 days ago
Needs compilation? yes
License GPL-3
CRAN checks ExomeDepth results

Downloads

Yesterday 11 0%
Last 7 days 25 -22%
Last 30 days 111 +6%
Last 90 days 340 -81%
Last 365 days 6.430 +1%

Maintainer

Maintainer

Vincent Plagnol

v.plagnol@ucl.ac.uk

Authors

Vincent Plagnol

aut / cre

Material

Reference manual
Package source

Vignettes

ExomeDepth

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

ExomeDepth archive

Depends

R ≥ 3.4.0

Imports

Biostrings
IRanges
Rsamtools
GenomicRanges ≥ 1.23.0
aod
VGAM ≥ 0.8.4
methods
GenomicAlignments
dplyr
magrittr

Suggests

knitr