CRAN/E | DUBStepR

DUBStepR

Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data

Installation

About

Determining the optimal set of feature genes to characterise cell types in single-cell RNA sequencing data using stepwise regression on gene-gene correlations. doi:10.1101/2020.10.07.330563.

Key Metrics

Version 1.2.0
R ≥ 3.5.0
Published 2021-10-05 925 days ago
Needs compilation? no
License MIT
License File
CRAN checks DUBStepR results

Downloads

Yesterday 3
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Last 30 days 76 -16%
Last 90 days 306 +34%
Last 365 days 1.560 -49%

Maintainer

Maintainer

Bobby Ranjan

ranjan_bobby@gis.a-star.edu.sg

Authors

Bobby Ranjan

aut / cre

Kunal Mishra

ctb

Shyam Lab

cph

Bryan Hanson

ctb

Damian Coventry

ctb

Brandon Crosby

ctb

Gregoire Thomas

ctb

Material

README
Reference manual
Package source

Vignettes

DUBStepR Vignette

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

DUBStepR archive

Depends

R ≥ 3.5.0

Imports

Matrix
matrixcalc
RANN
qlcMatrix
parallel
stats
Seurat
methods
graphics

Suggests

rmarkdown
knitr
hdf5r
dplyr