CRAN/E | DMRMark

DMRMark

DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data

Installation

About

Perform differential analysis for methylation array data. Detect differentially methylated regions (DMRs) from array M-values. The core is a Non-homogeneous Hidden Markov Model for estimating spatial correlation and a novel Constrained Gaussian Mixture Model for modeling the M-value pairs of each individual locus.

Key Metrics

Version 1.1.1
Published 2017-04-21 2556 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks DMRMark results

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Maintainer

Maintainer

Linghao SHEN

sl013@ie.cuhk.edu.hk

Authors

Linghao SHEN

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

DMRMark archive

Depends

MCMCpack
mvtnorm
ellipse