CRAN/E | CPBayes

CPBayes

Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations

Installation

About

A Bayesian meta-analysis method for studying cross-phenotype genetic associations. It uses summary-level data across multiple phenotypes to simultaneously measure the evidence of aggregate-level pleiotropic association and estimate an optimal subset of traits associated with the risk locus. CPBayes is based on a spike and slab prior. The methodology is available from: A Majumdar, T Haldar, S Bhattacharya, JS Witte (2018) doi:10.1371/journal.pgen.1007139.

github.com/ArunabhaCodes/CPBayes
Bug report File report

Key Metrics

Version 1.1.0
R ≥ 3.2.0
Published 2020-12-02 1232 days ago
Needs compilation? no
License GPL-3
CRAN checks CPBayes results

Downloads

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Maintainer

Maintainer

Arunabha Majumdar

statgen.arunabha@gmail.com

Authors

Arunabha Majumdar

aut / cre

Tanushree Haldar

aut

John Witte

ctb

Material

README
NEWS
Reference manual
Package source

In Views

Bayesian
MetaAnalysis

Vignettes

CPBayes (Bayesian meta analysis for studying cross-phenotype genetic associations) package

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

CPBayes archive

Depends

R ≥ 3.2.0

Imports

MASS
stats
forestplot
grDevices
purrr
mvtnorm

Suggests

testthat
knitr
rmarkdown